Example 2



In the second part, FREQ calculates the frequency of all possible tuplas of the indicated size, and it shows the results in a table. If for some of tuples the frequency is zero, this one will not appear in the table.

In the right of the frequency, we see a button that allows to see the graphical representation of this tupla in the chain (in the same way that in the first part).

For example, if we put this Fasta file:

homo.fna

>AB000263 |acc=AB000263|descr=Homo sapiens mRNA for prepro cortistatin like peptide, complete cds.|len=368
ACAAGATGCCATTGTCCCCCGGCCTCCTGCTGCTGCTGCTCTCCGGGGCC ACGGCCACCGCTGCCCTGCCCCTGGAGGGTGGCCCCACCGGCCGAGACAG CGAGCATATGCAGGAAGCGGCAGGAATAAGGAAAAGCAGCCTCCTGACTT TCCTCGCTTGGTGGTTTGAGTGGACCTCCCAGGCCAGTGCCGGGCCCCTC ATAGGAGAGGAAGCTCGGGAGGTGGCCAGGCGGCAGGAAGGCGCACCCCC CCAGCAATCCGCGCGCCGGGACAGAATGCCCTGCAGGAACTTCTTCTGGA AGACCTTCTCCTCCTGCAAATAAAACCTCACCCATGAATGCTCACGCAAGTTTAATTACAGACCTGAA

And search for this long: 2.

We will obtain this table:

example1-1.png

If we want to see the image, we have to make click in the button and we will obtain a page like in the firs part (Example 1). If we click in the button of tuple CC wi will obtain this image:

example1-2.png